getMtpModelInputs.m

% This function is part of the NMSM Pipeline, see file for full license.
%
% This function gets the model parameters from the OpenSim model for
% muscle tendon personalization.
%
% (struct) => (struct)
% looks up muscle parameters and adds them to input.


function inputs = getMtpModelInputs(inputs)
inputs.optimalFiberLength = [];
inputs.tendonSlackLength = [];
inputs.pennationAngle = [];
inputs.maxIsometricForce = [];
model = Model(inputs.model);
for i = 1:length(inputs.muscleNames)
    muscleName = inputs.muscleNames(i);
    inputs.optimalFiberLength(end+1) = model.getForceSet(). ...
        getMuscles().get(muscleName).getOptimalFiberLength();
    inputs.tendonSlackLength(end+1) = model.getForceSet(). ...
        getMuscles().get(muscleName).getTendonSlackLength();
    inputs.pennationAngle(end+1) = model.getForceSet(). ...
        getMuscles().get(muscleName). ...
        getPennationAngleAtOptimalFiberLength();
    inputs.maxIsometricForce(end+1) = model.getForceSet(). ...
        getMuscles().get(muscleName).getMaxIsometricForce();
end
end